Nexus DB

Nexus DB

Searchable Reference Data Built for Nexus Integration

Nexus DB is an invaluable resource and included with all Nexus Copy Number subscriptions.

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Features And Benefits

Store your own data

As a Nexus user, you can use NexusDB to store your own data, privately. Data is secured off-site using Amazon’s AWS platform.

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Reference Data

Query by gene or region of interest to quickly find samples and clinical annotations, with the ability to compare data generated by different aCGH, SNP array, and NGS platforms.

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Reference Data in Nexus DB

Ability to share your own data easily with the people you choose and collaborate across the globe.

Available Data in Nexus DB

Constitutional Genetics

  • AGRE – Autism Genetic Research Exchange. All data available in both HG18 and HG19 genome builds.

  • ISCA/ICCG (dbVAR) – Structural variation (SV) database of genomic variants with clinical annotations for a broad range of constitutional genetic disorders.
  • Affymetrix CytoScan HD Reference Project – 375 normal samples used to create the CytoScan HD reference file

Store your own data

Cancer

  • TCGA Premier – reprocessed and manually curated TCGA data, resulting in dramatically increased fidelity and corresponding reduction in false-positive calls.
  • Datasets include Acute Myeloid Leukemia, Glioblastoma (GBM), Ovarian Serous Cyst adenocarcinoma, Kidney Renal Clear Cell Carcinoma, Colon Adenocarcinoma, Lung squamous carcinoma, and more.
  • See the full list

Reference Data in Nexus DB

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